Defacer for Structural MRI

Filed under: Tools

Status: In production

This algorithm, which is still under the validation phase, locates the subject’s facial features and removes them without disturbing brain tissue. The algorithm was devised to work on T1-weighted structural MRI.

Process:

  • Defacer produces a defaced structural image and an image of the applied mask.
  • The code mri_deface produces a facial mask.
  • The code mri_mask is then used to apply the mask to the original volume, resulting in a defaced structural image.

For images in other modalities, the mask can be co-registered to the image before application.

For more information: http://www.na-mic.org/Wiki/index.php/Mbirn:_Defacer_for_structural_MRI

BIRN is supported by NIH grants 1U24-RR025736, U24-RR021992, U24-RR021760 and by the Collaborative Tools Support Network Award 1U24-RR026057-01.